- indir=$1
- batchID=`basename $indir`
- sample=$indir/sample
- fusion_stat_file=$indir/${batchID}_fusion_count_stat.txt
- for i in `cat $sample`;do cat $indir/${i}/${i}_fusion_stat.txt;done | head -n1 > $fusion_stat_file;
- for i in `cat $sample`;do cat $indir/${i}/${i}_fusion_stat.txt;done | grep -v Sample >> $fusion_stat_file;
- QC_stat_file=$indir/${batchID}_QC_stat.txt
- for i in `cat $sample`;do cat $indir/${i}/${i}_QC_stat.txt;done | head -n1 > $QC_stat_file;
- for i in `cat $sample`;do cat $indir/${i}/${i}_QC_stat.txt;done | grep -v Sample >> $QC_stat_file
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