- #!/bin/sh
- #PBS -N fusion_unpair
- #PBS -j oe
- #PBS -l ncpus=20
- #PBS -l nodes=1
- #PBS -l mem=50G
- source /home/liuxiangqiong/miniconda3/bin/activate base
- cmddir=/cgdata/liuxiangqiong/work62pancancer/Client/v0/script/20220705
- starttime="`date '+%Y%m%d%H%M%S'`"
- echo "for genefusion with Genefuse"
- #$cmddir/s7_noUMI_fusion_GeneFuse_unpair_20220206.sh
- $cmddir/s7_noUMI_fusion_GeneFuse_unpair_20220929.sh
- endtime="`date '+%Y%m%d%H%M%S'`"
- echo "run " $[$endtime-$starttime]"s">${inputpath}/${tumor}_fusion_unpair.log1
- echo "${tumor} genefuse finish!" >>${inputpath}/${tumor}_fusion_unpair.log1
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