#!/bin/sh
#PBS -N fusion_unpair
#PBS -j oe
#PBS -l ncpus=20
#PBS -l nodes=1
#PBS -l mem=50G
source  /home/liuxiangqiong/miniconda3/bin/activate base
cmddir=/cgdata/liuxiangqiong/work62pancancer/Client/v0/script/20220705
starttime="`date '+%Y%m%d%H%M%S'`"
echo "for genefusion with Genefuse"
#$cmddir/s7_noUMI_fusion_GeneFuse_unpair_20220206.sh
$cmddir/s7_noUMI_fusion_GeneFuse_unpair_20220929.sh
endtime="`date '+%Y%m%d%H%M%S'`"
echo "run " $[$endtime-$starttime]"s">${inputpath}/${tumor}_fusion_unpair.log1
echo "${tumor} genefuse finish!" >>${inputpath}/${tumor}_fusion_unpair.log1